genome Mzeb twoBitPath Mzeb/Mzeb.2bit trackDb Mzeb/trackDb.txt groups groups.txt htmlPath Mzeb/description.html description Mzeb organism Mzeb orderKey 4800 scientificName Mzeb defaultPos LG1:100000-100100 blat wfitch.bio.uci.edu 17779 #### Mzeb/trackDb.txt track hubCentral compositeTrack on shortLabel my hub longLabel my hub group comphub subGroup1 view Track_Type Snake=Alignments subGroup2 orgs Organisms Drer=Drer Onil=Onil Mzeb=Mzeb dragAndDrop subTracks #allButtonPair on dimensions dimensionX=view dimensionY=orgs noInherit on priority 0 centerLabelsDense on visibility full html ../documentation/hubCentral type bigBed 3 track hubCentralAlignments shortLabel Alignments view Alignments visibility full subTrack hubCentral track snakeDrer longLabel Drer shortLabel Drer otherSpecies Drer visibility full parent hubCentralAlignments showSnpWidth 2898 priority 4 bigDataUrl ../lod.txt type halSnake group snake subGroups view=Snake orgs=Drer track snakeOnil longLabel Onil shortLabel Onil otherSpecies Onil visibility full parent hubCentralAlignments showSnpWidth 2898 priority 4 bigDataUrl ../lod.txt type halSnake group snake subGroups view=Snake orgs=Onil track snakeMzeb longLabel Mzeb shortLabel Mzeb otherSpecies Mzeb visibility full parent hubCentralAlignments showSnpWidth 2898 priority 4 bigDataUrl ../lod.txt type halSnake group snake subGroups view=Snake orgs=Mzeb track alignability bigDataUrl Mzeb.alignability.bw shortLabel Alignability longLabel Alignability from Progressive Cactus type bigWig track genes_ compositeTrack on shortLabel Genes longLabel Genes and Gene liftovers group genes priority 149.1 visibility dense type bed 3 . noInherit on html ../trackDescriptions/genes track genesMzeb_ parent genes_ shortLabel Mzeb longLabel M. zeb. gene annotation priority 5 spectrum on maxWindowToDraw 10000000 colorByStrand 50,50,150 150,50,50 type bigBed 12 + searchIndex name bigDataUrl Genes/M_zeb.Bed12.bigBed track genesMzebDrer_ parent genes_ shortLabel MzebDrer longLabel M. zeb gene annotations with D. rer names (protein blast) priority 6 spectrum on maxWindowToDraw 10000000 colorByStrand 50,50,150 150,50,50 type bigBed 12 + searchIndex name, name2 searchIndex name, name3 bigDataUrl Genes/M_zeb.2.D_rer.bigBed searchTrix Genes/M_zeb.2.D_rer.symbol.ix searchTrix Genes/M_zeb.2.D_rer.fullname.ix labelFields name3 track F2_L_Rakers_LOD container multiWig shortLabel F2_L_Rakers longLabel F2_L_Rakers type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_Rakers_10_percent_FPR bigDataUrl LODscans/F2_L_Rakers_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_Rakers_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_Rakers_1_percent_FPR bigDataUrl LODscans/F2_L_Rakers_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_Rakers_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_Rakers_peak_1_LOD bigDataUrl LODscans/F2_L_Rakers_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_L_Rakers_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_L_Stripe_LOD container multiWig shortLabel F2_L_Stripe longLabel F2_L_Stripe type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_Stripe_10_percent_FPR bigDataUrl LODscans/F2_L_Stripe_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_Stripe_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_Stripe_1_percent_FPR bigDataUrl LODscans/F2_L_Stripe_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_Stripe_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_Band_LOD container multiWig shortLabel F2_L_Band longLabel F2_L_Band type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_Band_10_percent_FPR bigDataUrl LODscans/F2_L_Band_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_Band_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_Band_1_percent_FPR bigDataUrl LODscans/F2_L_Band_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_Band_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_Band_peak_1_LOD bigDataUrl LODscans/F2_L_Band_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_L_Band_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_L_RA_length_LOD container multiWig shortLabel F2_L_RA_length longLabel F2_L_RA_length type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_RA_length_10_percent_FPR bigDataUrl LODscans/F2_L_RA_length_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_RA_length_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_RA_length_1_percent_FPR bigDataUrl LODscans/F2_L_RA_length_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_RA_length_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_De_thickness_LOD container multiWig shortLabel F2_L_De_thickness longLabel F2_L_De_thickness type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_De_thickness_10_percent_FPR bigDataUrl LODscans/F2_L_De_thickness_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_De_thickness_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_De_thickness_1_percent_FPR bigDataUrl LODscans/F2_L_De_thickness_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_De_thickness_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_Pqpost_length_LOD container multiWig shortLabel F2_L_Pqpost_length longLabel F2_L_Pqpost_length type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_Pqpost_length_10_percent_FPR bigDataUrl LODscans/F2_L_Pqpost_length_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_Pqpost_length_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_Pqpost_length_1_percent_FPR bigDataUrl LODscans/F2_L_Pqpost_length_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_Pqpost_length_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_Pqpost_length_peak_1_LOD bigDataUrl LODscans/F2_L_Pqpost_length_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_L_Pqpost_length_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_L_pqGZ_width_LOD container multiWig shortLabel F2_L_pqGZ_width longLabel F2_L_pqGZ_width type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_pqGZ_width_10_percent_FPR bigDataUrl LODscans/F2_L_pqGZ_width_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_pqGZ_width_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_pqGZ_width_1_percent_FPR bigDataUrl LODscans/F2_L_pqGZ_width_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_pqGZ_width_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_pqGZ_width_peak_1_LOD bigDataUrl LODscans/F2_L_pqGZ_width_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_L_pqGZ_width_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_L_pmx_asc_proc_LOD container multiWig shortLabel F2_L_pmx_asc_proc longLabel F2_L_pmx_asc_proc type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_pmx_asc_proc_10_percent_FPR bigDataUrl LODscans/F2_L_pmx_asc_proc_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_pmx_asc_proc_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_pmx_asc_proc_1_percent_FPR bigDataUrl LODscans/F2_L_pmx_asc_proc_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_pmx_asc_proc_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_pmx_asc_proc_peak_1_LOD bigDataUrl LODscans/F2_L_pmx_asc_proc_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_L_pmx_asc_proc_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_L_pmx_dent_proc_LOD container multiWig shortLabel F2_L_pmx_dent_proc longLabel F2_L_pmx_dent_proc type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_pmx_dent_proc_10_percent_FPR bigDataUrl LODscans/F2_L_pmx_dent_proc_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_pmx_dent_proc_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_pq_jj_angle_LOD container multiWig shortLabel F2_L_pq_jj_angle longLabel F2_L_pq_jj_angle type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_pq_jj_angle_10_percent_FPR bigDataUrl LODscans/F2_L_pq_jj_angle_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_pq_jj_angle_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_F2_pqGZ_raw_LOD container multiWig shortLabel F2_L_F2_pqGZ_raw longLabel F2_L_F2_pqGZ_raw type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_F2_pqGZ_raw_10_percent_FPR bigDataUrl LODscans/F2_L_F2_pqGZ_raw_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_F2_pqGZ_raw_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_F2_pqGZ_raw_1_percent_FPR bigDataUrl LODscans/F2_L_F2_pqGZ_raw_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_F2_pqGZ_raw_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_F2_pqGZ_raw_peak_1_LOD bigDataUrl LODscans/F2_L_F2_pqGZ_raw_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_L_F2_pqGZ_raw_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_L_F2_pqGZ_adj_LOD container multiWig shortLabel F2_L_F2_pqGZ_adj longLabel F2_L_F2_pqGZ_adj type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_L_F2_pqGZ_adj_10_percent_FPR bigDataUrl LODscans/F2_L_F2_pqGZ_adj_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_L_F2_pqGZ_adj_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_L_F2_pqGZ_adj_1_percent_FPR bigDataUrl LODscans/F2_L_F2_pqGZ_adj_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_L_F2_pqGZ_adj_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_L_F2_pqGZ_adj_peak_1_LOD bigDataUrl LODscans/F2_L_F2_pqGZ_adj_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_L_F2_pqGZ_adj_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_NCwidth_post_LOD container multiWig shortLabel F2_NCwidth_post longLabel F2_NCwidth_post type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_NCwidth_post_10_percent_FPR bigDataUrl LODscans/F2_NCwidth_post_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_NCwidth_post_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_Rakers_LOD container multiWig shortLabel F2_Rakers longLabel F2_Rakers type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_Rakers_10_percent_FPR bigDataUrl LODscans/F2_Rakers_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_Rakers_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_BAND_LOD container multiWig shortLabel F2_BAND longLabel F2_BAND type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_BAND_10_percent_FPR bigDataUrl LODscans/F2_BAND_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_BAND_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F2_BAND_1_percent_FPR bigDataUrl LODscans/F2_BAND_99.bw shortLabel 1P longLabel 1_percent_FP parent F2_BAND_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F2_BAND_peak_1_LOD bigDataUrl LODscans/F2_BAND_peak.bw shortLabel peak longLabel peak_1_LOD parent F2_BAND_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F2_PQpostLength_LOD container multiWig shortLabel F2_PQpostLength longLabel F2_PQpostLength type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F2_PQpostLength_10_percent_FPR bigDataUrl LODscans/F2_PQpostLength_90.bw shortLabel 10P longLabel 10_percent_FP parent F2_PQpostLength_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F3_L_Stripe_LOD container multiWig shortLabel F3_L_Stripe longLabel F3_L_Stripe type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F3_L_Stripe_10_percent_FPR bigDataUrl LODscans/F3_L_Stripe_90.bw shortLabel 10P longLabel 10_percent_FP parent F3_L_Stripe_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F3_L_Stripe_1_percent_FPR bigDataUrl LODscans/F3_L_Stripe_99.bw shortLabel 1P longLabel 1_percent_FP parent F3_L_Stripe_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F3_L_Stripe_peak_1_LOD bigDataUrl LODscans/F3_L_Stripe_peak.bw shortLabel peak longLabel peak_1_LOD parent F3_L_Stripe_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F3_L_Band_LOD container multiWig shortLabel F3_L_Band longLabel F3_L_Band type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F3_L_Band_10_percent_FPR bigDataUrl LODscans/F3_L_Band_90.bw shortLabel 10P longLabel 10_percent_FP parent F3_L_Band_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F3_L_Band_1_percent_FPR bigDataUrl LODscans/F3_L_Band_99.bw shortLabel 1P longLabel 1_percent_FP parent F3_L_Band_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F3_L_Band_peak_1_LOD bigDataUrl LODscans/F3_L_Band_peak.bw shortLabel peak longLabel peak_1_LOD parent F3_L_Band_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F3_L_De_thickness_LOD container multiWig shortLabel F3_L_De_thickness longLabel F3_L_De_thickness type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F3_L_De_thickness_10_percent_FPR bigDataUrl LODscans/F3_L_De_thickness_90.bw shortLabel 10P longLabel 10_percent_FP parent F3_L_De_thickness_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F3_L_De_thickness_1_percent_FPR bigDataUrl LODscans/F3_L_De_thickness_99.bw shortLabel 1P longLabel 1_percent_FP parent F3_L_De_thickness_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F3_L_De_thickness_peak_1_LOD bigDataUrl LODscans/F3_L_De_thickness_peak.bw shortLabel peak longLabel peak_1_LOD parent F3_L_De_thickness_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F3_L_Pqpost_length_LOD container multiWig shortLabel F3_L_Pqpost_length longLabel F3_L_Pqpost_length type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F3_L_Pqpost_length_10_percent_FPR bigDataUrl LODscans/F3_L_Pqpost_length_90.bw shortLabel 10P longLabel 10_percent_FP parent F3_L_Pqpost_length_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F3_L_pqGZ_width_LOD container multiWig shortLabel F3_L_pqGZ_width longLabel F3_L_pqGZ_width type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F3_L_pqGZ_width_10_percent_FPR bigDataUrl LODscans/F3_L_pqGZ_width_90.bw shortLabel 10P longLabel 10_percent_FP parent F3_L_pqGZ_width_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F3_L_pqGZ_width_1_percent_FPR bigDataUrl LODscans/F3_L_pqGZ_width_99.bw shortLabel 1P longLabel 1_percent_FP parent F3_L_pqGZ_width_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F3_L_pqGZ_width_peak_1_LOD bigDataUrl LODscans/F3_L_pqGZ_width_peak.bw shortLabel peak longLabel peak_1_LOD parent F3_L_pqGZ_width_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3 track F3_Band_LOD container multiWig shortLabel F3_Band longLabel F3_Band type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on alwaysZero on dragAndDrop subtracks track F3_Band_10_percent_FPR bigDataUrl LODscans/F3_Band_90.bw shortLabel 10P longLabel 10_percent_FP parent F3_Band_LOD type bigWig graphTypeDefault points color 0,0,255 visibility 1 track F3_Band_1_percent_FPR bigDataUrl LODscans/F3_Band_99.bw shortLabel 1P longLabel 1_percent_FP parent F3_Band_LOD type bigWig graphTypeDefault points color 255,0,0 visibility 2 track F3_Band_peak_1_LOD bigDataUrl LODscans/F3_Band_peak.bw shortLabel peak longLabel peak_1_LOD parent F3_Band_LOD type bigWig graphTypeDefault points color 0,255,0 visibility 3