track DSPRsnps
bigDataUrl SCGB.founders-only-PASS-Q30-SNPs.vcf.gz
shortLabel DSPR Q30 SNPs
longLabel SNPs identified by a bwa GATK pipeline
type vcfTabix

track DSPRindel
bigDataUrl SCGB.founders-only-PASS-Q30-INDEL.vcf.gz
shortLabel DSPR Q30 INDELs
longLabel identified by a bwa GATK pipeline 
type vcfTabix

track hubCentral
compositeTrack on
shortLabel Platanus
longLabel Platanus to Progressive Cactus
group comphub
subGroup1 view Track_Type Snake=Alignments  
subGroup2 orgs Organisms dm3=dm3 A1=A1 A2=A2 A3=A3 A4=A4 A5=A5 A6=A6 A7=A7 AB8=AB8 B1=B1 B2=B2 B3ST=B3ST B4=B4 B5=B5 B6=B6 B7=B7
dragAndDrop subTracks
#allButtonPair on
dimensions dimensionX=view dimensionY=orgs
noInherit on
priority 0
centerLabelsDense on
visibility full
html ../documentation/hubCentral
type bigBed 3

	track hubCentralAlignments
	shortLabel Alignments
	view Alignments
	visibility pack
	subTrack hubCentral

		track snakeA1
		longLabel A1
		shortLabel A1
		otherSpecies A1
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=A1

		track snakeA2
		longLabel A2
		shortLabel A2
		otherSpecies A2
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=A2

		track snakeA3
		longLabel A3
		shortLabel A3
		otherSpecies A3
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=A3

		track snakeA4
		longLabel A4
		shortLabel A4
		otherSpecies A4
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=A4

		track snakeA5
		longLabel A5
		shortLabel A5
		otherSpecies A5
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=A5

		track snakeA6
		longLabel A6
		shortLabel A6
		otherSpecies A6
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=A6

		track snakeA7
		longLabel A7
		shortLabel A7
		otherSpecies A7
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=A7

		track snakeAB8
		longLabel AB8
		shortLabel AB8
		otherSpecies AB8
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=AB8

		track snakeB1
		longLabel B1
		shortLabel B1
		otherSpecies B1
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=B1

		track snakeB2
		longLabel B2
		shortLabel B2
		otherSpecies B2
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=B2

		track snakeB3ST
		longLabel B3ST
		shortLabel B3ST
		otherSpecies B3ST
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=B3ST

		track snakeB4
		longLabel B4
		shortLabel B4
		otherSpecies B4
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=B4

		track snakeB5
		longLabel B5
		shortLabel B5
		otherSpecies B5
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=B5

		track snakeB6
		longLabel B6
		shortLabel B6
		otherSpecies B6
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=B6

		track snakeB7
		longLabel B7
		shortLabel B7
		otherSpecies B7
		visibility full
		parent hubCentralAlignments off
		showSnpWidth 7804
		priority 2
		bigDataUrl ../lod.txt
		type halSnake
		group snake
		subGroups view=Snake orgs=B7