track hubCentral compositeTrack on shortLabel my hub longLabel my hub group comphub subGroup1 view Track_Type Snake=Alignments subGroup2 orgs Organisms Anc0=Anc0 dm6=dm6 A1=A1 A2=A2 A3=A3 A4=A4 A5=A5 A6=A6 A7=A7 AB8=AB8 B1=B1 B2=B2 B3=B3 B4=B4 B6=B6 B7=B7 OreR=OreR dragAndDrop subTracks #allButtonPair on dimensions dimensionX=view dimensionY=orgs noInherit on priority 0 centerLabelsDense on visibility full html ../documentation/hubCentral type bigBed 3 track hubCentralAlignments shortLabel Alignments view Alignments visibility full subTrack hubCentral track snakeAnc0 longLabel Anc0 shortLabel Anc0 otherSpecies Anc0 visibility full parent hubCentralAlignments showSnpWidth 20515 priority 2 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=Anc0 track snakeA1 longLabel A1 shortLabel A1 otherSpecies A1 visibility full parent hubCentralAlignments showSnpWidth 20515 priority 4 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=A1 track snakeA2 longLabel A2 shortLabel A2 otherSpecies A2 visibility full parent hubCentralAlignments showSnpWidth 20515 priority 5 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=A2 track snakeA3 longLabel A3 shortLabel A3 otherSpecies A3 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 6 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=A3 track snakeA4 longLabel A4 shortLabel A4 otherSpecies A4 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 7 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=A4 track snakeA5 longLabel A5 shortLabel A5 otherSpecies A5 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 8 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=A5 track snakeA6 longLabel A6 shortLabel A6 otherSpecies A6 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 9 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=A6 track snakeA7 longLabel A7 shortLabel A7 otherSpecies A7 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 10 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=A7 track snakeAB8 longLabel AB8 shortLabel AB8 otherSpecies AB8 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 11 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=AB8 track snakeB1 longLabel B1 shortLabel B1 otherSpecies B1 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 12 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=B1 track snakeB2 longLabel B2 shortLabel B2 otherSpecies B2 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 13 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=B2 track snakeB3 longLabel B3 shortLabel B3 otherSpecies B3 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 14 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=B3 track snakeB4 longLabel B4 shortLabel B4 otherSpecies B4 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 15 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=B4 track snakeB6 longLabel B6 shortLabel B6 otherSpecies B6 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 16 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=B6 track snakeB7 longLabel B7 shortLabel B7 otherSpecies B7 visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 17 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=B7 track snakeOreR longLabel OreR shortLabel OreR otherSpecies OreR visibility hide parent hubCentralAlignments off showSnpWidth 20515 priority 18 bigDataUrl ../fly.hal type halSnake group snake subGroups view=Snake orgs=OreR track SVmask bigDataUrl ATACseq2022/SVmask.bb shortLabel SV masking longLabel regions masked due to a SV type bigNarrowPeak track ATACseqPeak bigDataUrl ATACseq2022/ATACseqPeaks.bb shortLabel ATACseqPeak longLabel ATACseq peaks from merging of four tissues type bigNarrowPeak track Variation compositeTrack on shortLabel Variation longLabel SNPs, INDELs, Structural Variants in DSPR priority 0 centerLabelsDense on type vcfTabix html ../documentation/hubCentral track DSPR_SNPs parent Variation on priority 1.1 bigDataUrl variation/DSPR.r6.SNPs.vcf.gz shortLabel DSPR Q30 SNPs longLabel SNPs identified by a bwa GATK pipeline visibility dense type vcfTabix track DSPR_INDELs parent Variation on priority 1.2 bigDataUrl variation/DSPR.r6.INDELs.vcf.gz shortLabel DSPR INDELs longLabel INDELs identified by a bwa GATK pipeline (not filtered) visibility dense type vcfTabix track DSPR_SVs parent Variation on priority 1.3 bigDataUrl variation/SV.0328.vcf.gz shortLabel SVs longLabel SVs identified by a Chakraborty pipeline July 2018 visibility full type vcfTabix track Brain_ATACseq container multiWig shortLabel Corrected Brain longLabel Coverage for Brain type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on dragAndDrop subtracks track A4_BR bigDataUrl ATACseq2022/A4_W_BR.bw shortLabel A4 longLabel Strain A4 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 27,158,119 track A5_BR bigDataUrl ATACseq2022/A5_W_BR.bw shortLabel A5 longLabel Strain A5 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 217,95,2 track A6_BR bigDataUrl ATACseq2022/A6_W_BR.bw shortLabel A6 longLabel Strain A6 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 117,112,179 track A7_BR bigDataUrl ATACseq2022/A7_W_BR.bw shortLabel A7 longLabel Strain A7 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 231,41,138 track B2_BR bigDataUrl ATACseq2022/B2_W_BR.bw shortLabel B2 longLabel Strain B2 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,166,30 track B3_BR bigDataUrl ATACseq2022/B3_W_BR.bw shortLabel B3 longLabel Strain B3 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 230,171,2 track B6_BR bigDataUrl ATACseq2022/B6_W_BR.bw shortLabel B6 longLabel Strain B6 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 166,118,29 track B7_BR bigDataUrl ATACseq2022/B7_W_BR.bw shortLabel B7 longLabel Strain B7 parent Brain_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,102,102 ########## track EyeDisk_ATACseq container multiWig shortLabel Corrected EyeDisc longLabel Coverage for EyeDisc type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on dragAndDrop subtracks track A4_ED bigDataUrl ATACseq2022/A4_W_ED.bw shortLabel A4 longLabel Strain A4 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 27,158,119 track A5_ED bigDataUrl ATACseq2022/A5_W_ED.bw shortLabel A5 longLabel Strain A5 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 217,95,2 track A6_ED bigDataUrl ATACseq2022/A6_W_ED.bw shortLabel A6 longLabel Strain A6 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 117,112,179 track A7_ED bigDataUrl ATACseq2022/A7_W_ED.bw shortLabel A7 longLabel Strain A7 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 231,41,138 track B2_ED bigDataUrl ATACseq2022/B2_W_ED.bw shortLabel B2 longLabel Strain B2 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,166,30 track B3_ED bigDataUrl ATACseq2022/B3_W_ED.bw shortLabel B3 longLabel Strain B3 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 230,171,2 track B6_ED bigDataUrl ATACseq2022/B6_W_ED.bw shortLabel B6 longLabel Strain B6 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 166,118,29 track B7_ED bigDataUrl ATACseq2022/B7_W_ED.bw shortLabel B7 longLabel Strain B7 parent EyeDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,102,102 ########## track Ovary_ATACseq container multiWig shortLabel Corrected Ovary longLabel Coverage for Ovary type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on dragAndDrop subtracks track A4_OV bigDataUrl ATACseq2022/A4_W_OV.bw shortLabel A4 longLabel Strain A4 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 27,158,119 track A5_OV bigDataUrl ATACseq2022/A5_W_OV.bw shortLabel A5 longLabel Strain A5 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 217,95,2 track A6_OV bigDataUrl ATACseq2022/A6_W_OV.bw shortLabel A6 longLabel Strain A6 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 117,112,179 track A7_OV bigDataUrl ATACseq2022/A7_W_OV.bw shortLabel A7 longLabel Strain A7 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 231,41,138 track B2_OV bigDataUrl ATACseq2022/B2_W_OV.bw shortLabel B2 longLabel Strain B2 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,166,30 track B3_OV bigDataUrl ATACseq2022/B3_W_OV.bw shortLabel B3 longLabel Strain B3 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 230,171,2 track B6_OV bigDataUrl ATACseq2022/B6_W_OV.bw shortLabel B6 longLabel Strain B6 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 166,118,29 track B7_OV bigDataUrl ATACseq2022/B7_W_OV.bw shortLabel B7 longLabel Strain B7 parent Ovary_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,102,102 ########## track WingDisk_ATACseq container multiWig shortLabel Corrected WingDisc longLabel Coverage for WingDisc type bigWig visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction maximum priority 1.2 configurable on autoScale on dragAndDrop subtracks track A4_WD bigDataUrl ATACseq2022/A4_W_WD.bw shortLabel A4 longLabel Strain A4 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 27,158,119 track A5_WD bigDataUrl ATACseq2022/A5_W_WD.bw shortLabel A5 longLabel Strain A5 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 217,95,2 track A6_WD bigDataUrl ATACseq2022/A6_W_WD.bw shortLabel A6 longLabel Strain A6 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 117,112,179 track A7_WD bigDataUrl ATACseq2022/A7_W_WD.bw shortLabel A7 longLabel Strain A7 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 231,41,138 track B2_WD bigDataUrl ATACseq2022/B2_W_WD.bw shortLabel B2 longLabel Strain B2 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,166,30 track B3_WD bigDataUrl ATACseq2022/B3_W_WD.bw shortLabel B3 longLabel Strain B3 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 230,171,2 track B6_WD bigDataUrl ATACseq2022/B6_W_WD.bw shortLabel B6 longLabel Strain B6 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 166,118,29 track B7_WD bigDataUrl ATACseq2022/B7_W_WD.bw shortLabel B7 longLabel Strain B7 parent WingDisk_ATACseq type bigWig graphTypeDefault points smoothingWindow 16 color 102,102,102